asn2xml (1)

asn2xml [\|-\|] [\|-b F\|] [\|-e\|] [\|-i filename\|] [\|-l filename\|] [\|-o filename\|] [\|-s\|]

asn2xml converts an NCBI Seq-entry or Bioseq-set from ASN.1 format to an isomorphic XML representation. It differs from asn2asn -x in that it converts packed sequence data back into human-readable ASCII text.

A summary of options is included below.

-

Print usage message

-b F

Input asnfile in text mode

-e

Input is a Seq-entry

-i filename

Read ASN.1 from filename (default is stdin)

-l filename

Log errors to filename (default is stderr)

-o filename

Write XML to filename (default is stdout)

-s

Input is a Seq-submit

The National Center for Biotechnology Information.

asn2all(1), asn2asn(1), asn2ff(1), asn2fsa(1), asn2gb(1), asndhuff(1), gene2xml(1), /usr/share/doc/ncbi-tools-bin/README.asn2xml, /usr/share/doc/libncbi6/ncbixml.txt.gz