Parse bed file and convert it to gff3.
gt bed_to_gff3 [BED_file]
-featuretype [string]
Set type of parsed BED features (default: BED_feature)
-thicktype [string]
Set type of parsed thick BED features (default: BED_thick_feature)
-blocktype [string]
Set type of parsed BED blocks (default: BED_block)
-o [filename]
redirect output to specified file (default: undefined)
-gzip [yes|no]
write gzip compressed output file (default: no)
-bzip2 [yes|no]
write bzip2 compressed output file (default: no)
-force [yes|no]
force writing to output file (default: no)
-help
display help and exit
-version
display version information and exit
Report bugs to <[email protected]>.