• antsMotionCorrStats

  • antsMotionCorrStats - create summary measures of the parameters that are output by antsMotionCorr. Currently only works for linear transforms. Outputs the mean and max displacements for the voxels within a provided mask, at each time point. By default the displacements are relative to the reference space, but the framewise option may be used to provide displacements between consecutive time points


-x, --mask mask.nii.gz

  • Mask image - compute displacements within mask. -m, --moco MOCOparams.csv

  • motion correction parameters from antsMotionCorr. -o, --output corrected.csv

  • Specify the output file for summary stats -f, --framewise

  • do framewise summarywise stats <VALUES>: 0 -h

  • Print the help menu (short version). <VALUES>: 0 --help

  • Print the help menu. <VALUES>: 1, 0