Framework and web portal specifically aimed at the integration of bioinformatics software and databanks.
mobyle Portal is accessible at http://localhost/cgi-bin/mobyle/portal.py
Configuration of the portal is available in /etc/mobyle/Config.py. Some administrator and user docs are available with the package. By default, anonymous access is authorized with captcha support and jobs are executed in local mode.
Custom classes can be specified in /etc/mobyle/CustomClasses.py
Documentation details user and admin usage. A step-by-step tutorial is available on the portal. To use this online tutorial, the package mobyle-programs is required.
Programs, viewers and worflows descriptors are located in /var/lib/mobyle/programs. Program environments are in /etc/mobyle/programs/. Package mobyle-programs offer a set of preconfigured programs based on emboss, phylip etc...
Tools to (un)deploy programs, viewers, ... are in /usr/share/mobyle/core/Tools.
Olivier Sallou (olivier.sallou (at) irisa.fr)